Genotyping and functional regression trees reveal ecological diversification within the toxic Microcystis aeruginosa complex along a wide environmental gradient
Applied and Environmental Microbiology (2021)
Gabriela Martínez de la Escalera, Angel M. Segura, Carla Kruk, Badih Ghattas, Frederick M. Cohan, Andrés Iriarte, Claudia Piccini
Broadscale phage therapy is unlikely to select for widespread evolution of bacterial resistance to virus infection
Virus Evolution (2020)
Frederick M Cohan, Matthew Zandi, Paul E. Turner
Systematics: The cohesive nature of bacterial species taxa
Current Biology (2019)
Frederick M Cohan
Transmission in the origins of bacterial diversity, from ecotypes to phyla
Microbiology Spectrum (2017)
Frederick M Cohan
Genomic plasticity and rapid host switching can promote the evolution of generalism: a case study in the zoonotic pathogen Campylobacter
Scientific Reports (2017)
Dan J. Woodcock, Peter Krusche, Norval J. C. Strachan, Ken J. Forbes, Frederick M Cohan, Guillaume Meric, Samuel K.
Bacillus nakamurai sp. nov., a black-pigment-producing strain
International Journal of Systematic and Evolutionary Microbiology (2016)
Frederick M Cohan
The molecular dimension of microbial species: 1. Ecological distinctions among, and homogeneity within, putative ecotypes of Synechococcus inhabiting the cyanobacterial mat of MushroomSpring, Yellowstone National Park
Frontiers in Microbiology (2015)
Eric D. Becraft, Jason M. Wood, Douglas B. Rusch, Michael Kuhl, Sheila Jensen, Donald A. Bryant, David W. Roberts, Frederick M. Cohan. David M. Ward
Accuracy and efficiency of algorithms for the demarcation of bacterial ecotypes from DNA sequence data
International Journal of Bioinformatics Research and Applications (2014)
Juan Carlos Francisco, Frederick M Cohan. Danny Krizanc
Speedy speciation in a bacterial microcosm: new species can arise as frequently as adaptations within a species
ISME Journal (2013)
Alexander F Koeppe, Joel O Wertheim, Laura Barone, Nicole Gentile, Danny Krizanc, Frederick M Cohan
Diversity of Bacteria and Archaea in hypersaline sediment from Death Valley National Park, California
MicrobiologyOpen (2012)
J.-S. Kim, M. Makama, J. Petito, N.-H. Park, Frederick M Cohan, R. S. Dungan
The variable subdomain of Escherichia coli SecA functions to regulate SecA ATPase activity and ADP release
Journal of Bacteriology (2012)
Sanchaita Das, Lorry M Grady, Jennifer Michtavy, Yayan Zhou, Frederick M Cohan, Manju M Hingorani, Donald B Oliver
Fine-scale distribution patterns of Synechococcus ecological diversity in the microbial mat of Mushroom Spring, Yellowstone National Park
Applied and Environmental Microbiology (2011)
Eric D. Becraft, Frederick M. Cohan, Michael Kuhl, Sheila I. Jensen, David M. Ward
Origins of bacterial diversity through horizontal gene transfer and adaptation to new ecological niches
FEMS Microbiology Reviews (2011)
Jane Wiedenbeck, Frederick M Cohan
Tracking bacterial responses to global warming with an ecotype-based systematics
Clinical Microbiology and Infection (2009)
Frederick M Cohan
Identifying the fundamental units of bacterial diversity: A paradigm shift to incorporate ecology into bacterial systematics
Proceedings of the National Academy of Sciences USA (2008)
A. F. Koeppel, E. B. Perry, J. Sikorski, A. Warner, D. M. Ward, A. P. Rooney, E. Brambilla, N. Connor, E. Nevo, R. M. Ratcliff, Frederick M. Cohan
A systematics for identifying the fundamental units of bacterial diversity
Current Biology (2007)
Frederick M. Cohan, E. B. Perry
Mass spectroscopic analysis of lipopeptides from Bacillus strains isolated from diverse geographical locations
FEMS Microbiology Letters (2007)
N. Price, A. P. Rooney, J. L. Swezey, E. Perry, Frederick M. Cohan
Cyanobacterial ecotypes in the microbial mat community of Mushroom Spring (Yellowstone National Park, Wyoming) as species-like units linking microbial community composition, structure and function
Proceedings of the Royal Society of London Series B (2006)
D. M. Ward, M. M. Bateson, M. J. Ferris, M. Kuhl, A. Wieland, A. Koeppe, Frederick M Cohan
Re-evaluating prokaryotic species
Nature Reviews Microbiology (2005)
D. Gevers, Frederick M Cohan, J. Lawrence, B. G. Spratt, T. Coenye, E. J. Feil, E. Stackebrandt, Y. Van de Peer, P. Vandamme, F. L. Thompson, J. Swings
Gradual evolution in bacteria: Evidence from Bacillus systematics
Microbiology (2003)
M. Feldgarden, N. Byrd, Frederick M Cohan
Bacillus sonorensis sp. nov., a close relative of Bacillus licheniformis, isolated from soil in the Sonoran Desert, Arizona
International Journal of Systematic and Evolutionary Microbiology (2001)
M. M. Palmisano, L. K. Nakamura, K. E. Duncan, C. A. Istock, Frederick M Cohan
Barriers to genetic exchange between bacterial species: Streptococcus pneumoniae transformation
Journal of Bacteriology (2000)
J. Majewski, P. Zawadzki, P. Pickerill, Frederick M Cohan, C. W. Dowson
Adapt globally, act locally: The effect of selective sweeps on bacterial sequence diversity
Genetics (1999)
J. Majewski, Frederick M Cohan
Relationship between the Bacillus subtilis clades associated with strains 168 and W23: a proposal for B. subtilis subsp. subtilis and B. subtilis subsp. spizizenii
International Journal of Systematic Bacteriology (1999)
L. K. Nakamura, M. S. Roberts, Frederick M Cohan
Discovery and classification of ecological diversity in the bacterial world: the role of DNA sequence data
International Journal of Systematic Bacteriology (1997)
T. Palys, L. K. Nakamura, Frederick M Cohan
Homology among nearly all plasmids infecting three Bacillus species
Journal of Bacteriology (1996)
Piotr Zawadzki, Margaret A. Riley, Frederick M Cohan
Differentiation strategies of soil rare and abundant microbial taxa in response to changing climatic regimes
Environmental Microbiology (2020)
Yuting Liang, Xian Xiao, Erin E. Nuccio, Mengting Yuan, Na Zhang, Kai Xue, Frederick M. Cohan, Jizhong Zhou, Bo Sun
Biogeography of American Northwest Hot Spring A/B′-Lineage Synechococcus Populations
Frontiers in microbiology (2020)
Eric D. Becraft, Jason M. Wood, Frederick M. Cohan, David M. Ward
Bacillus swezeyi sp. nov. and Bacillus haynesii sp. nov., isolated from desert soil
International Journal of Systematic and Evolutionary Microbiology (2017)
Christopher A Dunlap, David A Schisler, Elizabeth B Perry, Nora Connor, Frederick M Cohan, Alejandro P Rooney
Recombination does not hinder formation or detection of ecological species of Synechococcus inhabiting a hot spring cyanobacterial mat
Frontiers in Microbiology (2016)
Melanie C. Melendrez, Eric D. Becraft, Jason M. Wood, Millie T. Olsen, Donald A. Bryant, John F. Heidelberg, Douglas B. Rusch, Frederick M. Cohan, David M. Ward
Bacterial Speciation: Genetic Sweeps in Bacterial Species
Current Biology (2016)
Frederick M Cohan
The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
Frontiers in Microbiology (2015)
Millie T. Olsen, Shane Nowack, Jason M. Wood, Eric D. Becraft, Kurt LaButti, Anna Lipzen, Joel Martin, Wendy S. Shackwitz, Douglas B. Rusch, Frederick M. Cohan, Donald A. Bryant, David M. Ward
Genomic heterogeneity and ecological speciation within one subspecies of Bacillus subtilis
Applied and Environmental Microbiology (2014)
Sarah Kopac, Zhang Wang, Jane Wiedenbeck, Jessica Sherry, Martin Wu, Frederick M Cohan
Demarcation of bacterial ecotypes from DNA sequence data: A comparative analysis of four algorithms
2nd IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) (2012)
Juan Carlos Francisco, Frederick M Cohan, Danny Krizanc
The quorum sensing diversity within and between ecotypes of Bacillus subtilis
Environmental Microbiology (2012)
Polonca Stefanic, Francesca Decorosi, Carlo Viti, Janine Petito, Frederick M Cohan, Ines Mandic-Mulec
Community ecology of hot spring cyanobacterial mats: predominant populations and their functional potential
ISME Journal (2011)
C. G. Klatt, J. M. Wood, D. B. Rusch, M. M. Bateson, N. Hamamura, J. F. Heidelberg, A. R. Grossman, D. Bhaya, Frederick M. Cohan, M. Kuhl, D. A. Bryant, D. M. Ward
Influence of molecular resolution on sequence-based discovery of ecological diversity among Synechococcus populations in an alkaline siliceous hot spring microbial mat
Applied and Environmental Microbiology (2011)
Melanie C. Melendrez, R. K. Lange, Frederick M Cohan, David M. Ward
The ecology of speciation in Bacillus
Applied and Environmental Microbiology (2010)
Nora Connor, Johannes Sikorski, Alejandro P. Rooney, Sarah Kopac, Alexander F. Koeppel, Andrew Burger, Scott G. Cole, Elizabeth B. Perry, Danny Krizanc, Nicholas C. Field, Michele Slaton, Frederick M Cohan
The origins of ecological diversity in prokaryotes
Current Biology (2008)
Frederick M. Cohan, A. F. Koeppel
Toward a conceptual and operational union of bacterial systematics, ecology, and evolution
Proceedings of the Royal Society of London Series B (2006)
Frederick M Cohan
Which species concept for bacteria?—An E-debate
Infection, Genetics and Evolution (2005)
S. Godreuil, Frederick M Cohan, H. Shah, M. Tibayrenc
Protein-coding genes as molecular markers for ecologically distinct populations: the case of two Bacillus species
International Journal of Systematic and Evolutionary Microbiology (2000)
T. Palys, E. Berger, I. Mitrica, L. K. Nakamura, Frederick M Cohan
DNA sequence similarity requirements for interspecific recombination in Bacillus
Genetics (1999)
J. Majewski, Frederick M Cohan
The effect of mismatch repair and heteroduplex formation on sexual isolation in Bacillus
Genetics (1998)
Jacek Majewski, Frederick M Cohan
Bacillus vallismortis sp. nov., a close relative of Bacillus subtilis, isolated from soil in Death Valley, California
International Journal of Systematic Bacteriology (1996)
Michael S. Roberts, Lawrence K. Nakamura, Frederick M Cohan
Genomes Reveal the Cohesiveness of Bacterial Species Taxa And Provide a Path Toward Describing All of Bacterial Diversity
Trends in bacterial and fungal systematics (2021)
Frederick M Cohan
A theory-based pragmatism for discovering and classifying newly divergent species of bacterial pathogens
Genetics and Evolution of Infectious Disease, 2nd edition (2017)
Frederick M Cohan, Sarah Kopac
Bacterial species concepts
The Encyclopedia of Evolutionary Biology (2016)
Frederick M Cohan
Functional genomics in an ecological and evolutionary context: Maximizing the value of genomes in systems biology
Functional Genomics and Evolution of Photosynthetic Systems (2012)
David M. Ward(s), Christian G. Klatt, Jason Wood, Frederick M Cohan, Donald A. Bryant
Are species cohesive?—A view from bacteriology
Bacterial Population Genetics: A Tribute to Thomas S. Whittam (2011)
Frederick M Cohan
Metagenomic approaches for the identification of microbial species
Handbook of Molecular Microbial Ecology, Volume I: Metagenomics and Complementary Approaches (2011)
D. M. Ward, M. C. Melendrez, E. D. Becraft, C. G. Klatt, J. Wood, Frederick M. Cohan
Microbial diversity in hot spring cyanobacterial mats: pattern and prediction
Geothermal Biology and Geochemistry in Yellowstone National Park (2005)
Frederick M Cohan, D. M. Ward
Concepts of bacterial biodiversity for the age of genomics
Microbial Genomes (2004)
Frederick M Cohan
A theory-based pragmatism for discovering and classifying newly divergent bacterial species
Genetics and Evolution of Infectious Diseases (2011)
Sarah Kopac, Frederick M. Cohan
Functional genomics in an ecological and evolutionary context: Maximizing the value of genomes in systems biology
Functional Genomics and Evolution of Photosynthetic Systems (2011)
D. M. Ward, C. G. Klatt, J. Wood, Frederick M. Cohan, D. A. Bryant
Sequence-based discovery of ecological diversity within Legionella
Legionella: State of the Art 30 Years after Its Recognition (2006)
Frederick M Cohan, A. Koeppel, D. Krizanc
Periodic selection and ecological diversity in bacteria
Selective Sweep (2005)
Frederick M Cohan
Genetic structure of bacterial populations
Evolutionary Genetics from Molecules to Morphology (1999)
Frederick M Cohan
Systematics: The Cohesive Nature of Bacterial Species Taxa
Current Biology (2019)
Frederick M Cohan
Comment on “Population genomics of early events in the ecological differentiation of bacteria”
Science (2012)
Sarah M Kopac, Frederick M Cohan
Bacterial Speciation: Genetic Sweeps in Bacterial Species
Current Biology (2016)
Frederick M Cohan
Prokaryotic sex: Eukaryote-like qualities of recombination in an Archaean lineage
Current Biology (2012)
Frederick M Cohan, Stephanie Aracena
Synthetic genome: Now that we’re creators, what should we create?
Current Biology (2010)
Frederick M Cohan
How we can all share the fight against infectious disease
Arcadia Political Magazine (2019)
Frederick M Cohan
Herbert W. Conn: Formative decades of microbiology and evolutionary biology
Microbe (2014)
Frederick M Cohan, Alexa Boesel
As the world warms, deadly and disfiguring tropical diseases are inching their way toward the U.S.
Los Angeles Times (2018)
Frederick M Cohan, Isaac Klimasmith
